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Table 2 Summary of single test and NGS performed in the cohort

From: Biomarker testing for advanced lung cancer by next-generation sequencing; a valid method to achieve a comprehensive glimpse at mutational landscape

 

Total

Total

Single test vs. NGS

Single test

NGS test

Single test

NGS

EGFRmutation

n = 75 (%)

N = 100 (%)

n = 75 (%)

Mutant

18 (24)

23 (23)

18 (24)

20 (26.7)

 Exon 19 deletion

9

10

9

9

 p.L858R

6

6

6

4

 Exon 19 deletion and p.T790M

2

2

2

2

 p.L858R and p.T790M

1

1

1

1

 Uncommon mutations

_

4

_

4

Wild

57 (76)

77 (77)

57 (76)

55 (73.3)

 Concordant cases

  

73 (97.3)

 Discordant cases

  

2 (2.7)

ALK1 rearrangement

n = 73 (%)

n = 70 (%)

n = 49 (%)

 Mutant

5 (6.8)

5 (7.1)

5 (10.2)

4 (8.2)

 Wild

68 (93.2)

65 (92.9)

44 (89.8)

45 (91.8)

 Concordant cases

  

48 (98)

 Discordant cases

  

1 (2)

ROS1 fusion

n = 58 (%)

n = 70 (%)

n = 43 (%)

 Mutant

0 (0)

3 (4.3)

0 (0)

1 (2.3)

 Wild

58 (58)

67 (95.7)

43 (100)

42 (97.7)

 Concordant cases

  

42 (97.7)

 Discordant cases

  

1 (2.3)

c-METamplification

n = 62 (%)

N = 100 (%)

n = 62 (%)

 Mutant

4 (6.5)

2 (2)

4 (6.5)

0 (0)

 Wild

58 (93.5)

98 (98)

58 (93.5)

62 (100)

 Concordant cases

  

58 (93.5)

 Discordant cases

  

4 (6.5)